• First Release of the Bacterial Biobank of the Urban Environment (BBUE) 

      Iraola, Gregorio [Univ Mayor, Ctr Biol Integrat, Santiago, Chile]; Antelo, Veronica; Betancor, Laura; Barcala, María Victoria; Miguez, Diana; Gonnet, Gaston H. (AMER SOC MICROBIOLOGY, 2018)
      Metagenomics is providing a broad overview of bacterial functional diversity; however, culturing and biobanking are still essential for microbiology. Here, we present the Bacterial Biobank of the Urban Environment (BBUE), ...
    • MLSTar: automatic multilocus sequence typing of bacterial genomes in R 

      Iraola, Gregorio [Univ Mayor, Ctr Biol Integrat, Santiago, Chile]; Ferres, Ignacio (PEERJ INC, 2018)
      Multilocus sequence typing (MLST) is a standard tool in population genetics and bacterial epidemiology that assesses the genetic variation present in a reduced number of housekeeping genes (typically seven) along the genome. ...
    • The Tritryps Comparative Repeatome: Insights on Repetitive Element Evolution in Trypanosomatid Pathogens 

      Iraola, Gregorio [Univ Mayor, Ctr Biol Integrat, Santiago, Chile]; Pita, Sebastián; Díaz-Viraque, Florencia; Robello, Carlos (SPRINGER, 2019)
      The major human pathogens Trypanosoma cruzi, Trypanosoma brucei, and Leishmania major are collectively known as the Tritryps. The initial comparative analysis of their genomes has uncovered that Tritryps share a great ...
    • Urban metagenomics uncover antibiotic resistance reservoirs in coastal beach and sewage waters 

      Iraola, Gregorio [Univ Mayor, Ctr Biol Integrat, Santiago, Chile]; Fresia, Pablo; Antelo, Veronica; Salazar, Cecilia; Gimenez, Matias; D'Alessandro, Bruno; Afshinnekoo, Ebrahim; Mason, Christopher; Gonnet, Gaston H. (BMC, 2019)
      BackgroundMicrobial communities present in environmental waters constitute a reservoir for antibiotic-resistant pathogens that impact human health. For this reason, a diverse variety of water environments are being analyzed ...


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